X-Recipient: archive-cygwin AT delorie DOT com DKIM-Filter: OpenDKIM Filter v2.11.0 sourceware.org 8BA693857C5B DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=cygwin.com; s=default; t=1701160191; bh=JTL6wBBQig56oDPDGqku3Wfc2AOddSGkgorBQ6fClRI=; h=Date:To:In-Reply-To:References:Subject:List-Id:List-Unsubscribe: List-Archive:List-Post:List-Help:List-Subscribe:From:Reply-To: From; b=Oi+mTEZsDX/Z5bxqeICEzI65/AuBl2/KwX2chvhxkz4teD6x4Ip7ZqBg2stjlzpHu OT3nFWUIUkud2Py3QfQexQkCG4Z339na5leuqeK4D07J+Jlq2/cFGhiR+3JC2X4c+A +Gam8Zkji+z3nDFPEU+VB0Yg0ojkBxJPBpBntGVU= X-Original-To: cygwin AT cygwin DOT com Delivered-To: cygwin AT cygwin DOT com DMARC-Filter: OpenDMARC Filter v1.4.2 sourceware.org B31C23858298 ARC-Filter: OpenARC Filter v1.0.0 sourceware.org B31C23858298 ARC-Seal: i=1; a=rsa-sha256; d=sourceware.org; s=key; t=1701160176; cv=none; b=gApbsTzHU7xzbn+v0hYBcfbFnZCQCHUZj91RgzGcW9r6pUsBr9IzRwndgHKTkC0Iqi8bIDPyP52kZnUSuw/25JvfTURqqarX/q9RZQU5fz5/t7o1DaOfnZWxPSX8CtHHWcNdtohj2KCR7WewBho+CDgPWxLg18a4qX8XIciTN7c= ARC-Message-Signature: i=1; a=rsa-sha256; d=sourceware.org; s=key; t=1701160176; c=relaxed/simple; bh=SOOBlRcgGugaG2VFmiwZIfTT7twwIO4A8UktoTWJlxE=; h=Date:From:To:Message-ID:Subject:MIME-Version; b=VnHtVa26iGSUD2RhaW+UPEkUMu21eVtlmCyomjZw2RClczR5BBebnAr3mfcWDb64voysn/DozMjtHexI2MZG4O4zwO+2eWvEuPqapX27tqyjQNsI9EtXGdXmNpnRGMGZvz6Y6iEtxrewgwjqqUrY4yrE6uAcEdfU81v7Sb09xgc= ARC-Authentication-Results: i=1; server2.sourceware.org Date: Tue, 28 Nov 2023 09:29:33 +0100 (CET) To: Stephen P Carrier via Cygwin Message-ID: <834051042.1291114.1701160173532@email.df.eu> In-Reply-To: References: Subject: Re: R install.package() bug MIME-Version: 1.0 X-Priority: 3 Importance: Normal X-Mailer: Open-Xchange Mailer v7.10.6-Rev53 X-Originating-IP: 193.197.70.13 X-Originating-Client: open-xchange-appsuite X-Originating-Sender: markus DOT hoenicka AT mhoenicka DOT de X-Df-Sender: bWFya3VzLmhvZW5pY2thQG1ob2VuaWNrYS5kZQ== X-Spam-Status: No, score=-2.0 required=5.0 tests=BAYES_00, KAM_DMARC_STATUS, KAM_LAZY_DOMAIN_SECURITY, RCVD_IN_DNSWL_NONE, RCVD_IN_MSPIKE_H3, RCVD_IN_MSPIKE_WL, SPF_HELO_PASS, SPF_NONE, TXREP, T_SCC_BODY_TEXT_LINE autolearn=no autolearn_force=no version=3.4.6 X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on server2.sourceware.org X-BeenThere: cygwin AT cygwin DOT com X-Mailman-Version: 2.1.30 Precedence: list List-Id: General Cygwin discussions and problem reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , From: =?utf-8?q?Markus_H=C3=B6nicka_via_Cygwin?= Reply-To: =?UTF-8?Q?Markus_H=C3=B6nicka?= Content-Type: text/plain; charset="utf-8" Errors-To: cygwin-bounces+archive-cygwin=delorie DOT com AT cygwin DOT com Sender: "Cygwin" Content-Transfer-Encoding: 8bit X-MIME-Autoconverted: from base64 to 8bit by delorie.com id 3AS8Tq5O012787 > Stephen P Carrier via Cygwin hat am 2023-11-28 06:01 CET geschrieben: > > > I would like to report an issue with install.packages() experienced today > using the current R package. > > I installed R 4.3.0 on system: > > # uname -rs > CYGWIN_NT-10.0-20348 3.4.9-1.x86_64 > > I tried to install the DBI package, DBI_1.1.3.tar.gz, downloaded from a > mirror. > > I used > > install.packages("/path/to/DBI_1.1.13.tar.gz", repos = NULL); > > What happens is: > > ----- > Installing package into ‘/usr/lib/R/site-library’ > (as ‘lib’ is unspecified) > During startup - Warning message: > package ‘stats’ in options("defaultPackages") was not found > * installing *source* package ‘DBI’ ... > ** package ‘DBI’ successfully unpacked and MD5 sums checked > ** using staged installation > Error : Invalid DESCRIPTION file > > Malformed maintainer field. > > See section 'The DESCRIPTION file' in the 'Writing R Extensions' > manual. > ERROR: installing package DESCRIPTION failed for package ‘DBI’ > ----- > > I looked in the manual to see what DESCRIPTION files should look like. The > encoding is specified as UTF-8 in the file so the umlauts sprinkled > throughout should be fine. The 'Maintainer:' line contains an umlaut, I > removed it, after which the package installed without error. Umlauts > elsewhere in the DESCRIPTION file are not a problem. > > Seems like a bug. I don't have R 4.3.0 installed on a Linux system to test > if the bug is upstream from Cygwin, and my immediate problem is solved with > a simple workaround. > > Thanks to all for maintaining this fine product (Cygwin kernel and all the > packages). > > --Stephen Carrier > Hi Stephen, I came across this type of error with R on Cygwin, but not on FreeBSD or Linux. I'm still running R version 3.6.3 on Cygwin (I don't have root permissions on this box, so I'm forced to upgrade very infrequently) and I have positively seen this error when I set up my current installation. I use the same R packages on my Unix boxes at home and have never seen such an error. I don't think this is an upstream error. Unfortunately this is above my head to debug. regards, Markus -- Problem reports: https://cygwin.com/problems.html FAQ: https://cygwin.com/faq/ Documentation: https://cygwin.com/docs.html Unsubscribe info: https://cygwin.com/ml/#unsubscribe-simple