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From: "Rafael Kitover" <caelum AT debian DOT org>
To: <cygwin AT cygwin DOT com>
Subject: RE: Segmentation fault (core dumped)
Date: Tue, 3 Feb 2004 17:01:27 -0800
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X-OriginalArrivalTime: 04 Feb 2004 01:01:29.0179 (UTC) FILETIME=[6BE98AB0:01C3EABA]

>-----Original Message-----
>From: cygwin-owner AT cygwin DOT com [mailto:cygwin-owner AT cygwin DOT com] On Behalf Of
>Eva Bordeaux
>Sent: Tuesday, February 03, 2004 4:40 PM
>To: cygwin AT cygwin DOT com
>Subject: Segmentation fault (core dumped)
>
>Hello, I try to run my program on Windows machine using Cygwin.
>
>$ make clean all
>gcc     -c -o codon.o codon.ccreate_codon.c
>gcc     -c -o linkcurve.o linkcurve.c
>subpart.c: In function `part_extractor_closed':
>subpart.c:179: warning: passing arg 2 of `strcat' makes pointer from integer
>wit
>hout a cast
>gcc     -c -o suppress.o suppress.c
>gcc     -c -o feature_match.o feature_match.c
>gcc     -c -o ListDir.o ListDir.c
>gcc  main.o create_codon.o codon.o io.o k_smooth.o linkcurve.o lowe.o
>matrix.o p
>rematch.o subpart.o suppress.o feature_match.o ListDir.o   -lm  -o getmatch
>
>$ ./getmatch Query.raw 250 250 r rs
>check point 10 is fine
>Segmentation fault (core dumped)

Try this:

make clean all CC="gcc -g"
gdb --args ./getmatch Query.raw 250 250 r rs
(gdb) run

.. program runs and crashes

(gdb) bt

Then give the results to whoever wrote the program, or try to fix it yourself.

HTH

>
>When I run this on Unix machine at the lab in University , it works without
>any problem.
>What can be wrong? Maybe I didn't install all needed parts of compiler? When
>I installed Cygwin, I pick Base and all Devel categories.
>Any idea how to fix this is appreciated.
>Eva

-- 
Rafael

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